Software Gene Expression Biochemistry and Molecular Biology

Software Gene Expression Biochemistry and Molecular Biology

Software

Sites offering or presenting software to be used in research on the processes related to the central dogma of molecular biology: transcription from DNA to mRNA, splicing, translation to polypeptides, processing of the polypeptides (specific proteolysis, conjugation to carbohydrates, lipids and prosthetic groups) and the control mechanisms involved.

Top: Science: Biology: Biochemistry and Molecular Biology: Gene Expression: Software

See Also:

- From the Pittsburgh Superconputing Center, Carnegie Mellon University, Pittsburgh, USA.
- Makers of restriction enzyme database program, to design cloning experiments and produce high resolution graphics of plasmid maps and alignments. Includes corporate details of company in Bradford, Ontario.
- A web-based system for interactive design of oligo DNA for transcription profiling (hybridization) of genes.
- Software for Analysis of Protein and Nucleic-acid Sequences.
- Downloadable package integrating database, oligo ordering, DNA and protein analysis programs from Duesseldorf, Germany.
- Program from BJ Diagnostik GmbH that reads and processes DNA-fragment analysis files measured on ABI DNA-Sequencers [English and German].
- Software for transcription and cell cycle genes, providing peak intervals, max values as a function of decay of gene-activating principle, inhibitory mRNA, gene amplification, anabolic capacity and proteolysis.
- Markup language used as a standard method of exchanging gene expression data along with the associated gene and experiment annotation. Includes document type definition and tagging references.
- DNA damage analysis software for use with the comet assay technique for single cell electrophoresis from North Carolina and Nottingham, England.
- Software and and services for life science, particularly for microbial genomics, in Chicago, Illinois.
- Microarray analysis, lab inventory, and primer sequence database tools from San Francisco, California.
- Develops data analysis and visualization software for microarray gene expression data in Redwood City, California.
- The program makes statistical analysis and evaluation of the biological significance from microarray data.
- Microarray image analysis package which automatically grids spots, flags bad features, and plots analysis results. From Niles Scientific, Portola Valley, California.
- Katalog of links to sources of software for molecular biology.
- Developers of software for real time PCR primer design, TaqMan, molecular beacons, DNA microarray analysis, drawing restriction plasmid maps, gateway cloning experiments, protein interaction network and functional genomics
- LOLA is a platform for uploading and comparing microarray generated gene lists, with curated, annotated and published data linked to citations, in an interface maintained by the Genomics Core Facility, George Washington University.
- Supplies software for automated analysis and quantification of microarray images.
- Develops sequence analysis software for molecular biology.
- Provides software and custom software development for the visualization, analysis and classification of gene expression and proteomics data, image-guided surgery and information technology.
- Company selling software intended for molecular biology.
- Consensus, multiplex and degenerate primers, oligonucleotide database, secondary structure and difficult sequencing for researchers in PCR and related technologies. Developed since 1989, by Molecular Biology Insights Inc.
- Available from the Sanger Institute of the Wellcome Foundation, is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses.
- Links to programs and databases for online analysis of DNA, RNA and protein sequences from Pittsburg, Pennsylvania.

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